variochelin A
naturalproductmech:mibig-a0c17b3912 MINTED SEEDED
Structure
| Standard InChIKey | GRFONBIZQKDBOK-GVMUGWJFSA-N |
|---|---|
| SMILES | CCCCCCCCCCCC(=O)N[C@@H](CCCN=C(N)N)[C@@H](O)[C@H](C)C(=O)N[C@H](C(=O)N[C@H](CO)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCN(O)C(C)=O)C(=O)N[C@@H](CCCN(O)C(C)=O)C(=O)O)[C@H](O)C(=O)O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA032836 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Variovorax paradoxus B4 NCBITaxon:1246301 |
SOURCE_ASSERTION | mibig:BGC0002417 | PMID:27023373 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Variovorax boronicumulans NCBITaxon:436515 |
LOTUS | DOI:10.1021/ACS.JNATPROD.5B00932 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002417 | Variovorax paradoxus B4 NCBITaxon:1246301 |
CLUSTER_UNSTATED | genbank:CP003911.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002417 | MIBIG | 3 |
This page is generated from data/natural_products/amino_acids_and_peptides/variochelin-a.yaml, which is generated from the committed inventories. Neither is edited by hand.