vibrioferrin
naturalproductmech:mibig-c1b0b2a6f8 MINTED SEEDED
Structure
| Standard InChIKey | FPHRKFJYHKRDFJ-LWYCVJHGSA-N |
|---|---|
| SMILES | C[C@@H](C(=O)NCCC(C(=O)O)C(CC(=O)O)(C(=O)O)O)N1C(=O)CC[C@]1(C(=O)O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:197680 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Vibrio alginolyticus NCBITaxon:663 |
SOURCE_ASSERTION | mibig:BGC0000947 | PMID:17593352 |
Occurrences 7
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1021/IC9016883 |
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1093/OXFORDJOURNALS.JBCHEM.A124432 |
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1111/J.1574-6968.2011.02389.X |
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1128/JB.00162-13 |
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1128/JB.185.23.6938-6949.2003 |
| Vibrio parahaemolyticus NCBITaxon:670 |
LOTUS | DOI:10.1271/BBB.110379 |
| Vibrio alginolyticus NCBITaxon:663 |
LOTUS | DOI:10.1007/S00203-007-0261-6 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000947 | Vibrio alginolyticus NCBITaxon:663 |
CLUSTER_UNSTATED | genbank:DQ201184.2 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000947 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/vibrioferrin-2.yaml, which is generated from the committed inventories. Neither is edited by hand.