virginiafactin B
naturalproductmech:mibig-fe74398a09 MINTED SEEDED
Structure
| Standard InChIKey | QXRJHCKZVAJRMP-LEIMUPEMSA-N |
|---|---|
| SMILES | CCCCCCC[C@@H](O)CC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](CCC(N)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](CO)C(=O)N[C@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)O)[C@@H](C)CC |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA028627 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas sp. QS1027 NCBITaxon:2056244 |
BGC_CHARACTERIZED | mibig:BGC0002071 | DOI:10.1039/c9sc03633d |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Pseudomonas NCBITaxon:286 |
LOTUS | DOI:10.1039/C9SC03633D |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002071 | Pseudomonas sp. QS1027 NCBITaxon:2056244 |
CLUSTER_DEMONSTRATED | genbank:NZ_PHSU01000004.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002071 | MIBIG | 2 |
This page is generated from data/natural_products/amino_acids_and_peptides/virginiafactin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.