zelkovamycin E
naturalproductmech:mibig-248b6e640f MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | JXUQPNLBWOOGRB-HAIQEQOSSA-N |
|---|---|
| SMILES | C/C=C1\NC(=O)[C@@H](C)NC(=O)CNC(=O)[C@](C)(C(C)=O)NC(=O)[C@H](CC2=CNC3=C2C(OC)=CC=C3)NC(=O)C2=CSC(=N2)[C@@H](C)NC(=O)CN(C)C1=O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA032260 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Actinomadura graeca NCBITaxon:2750812 |
BGC_CORRELATED | mibig:BGC0002370 | PMID:33216552 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Kitasatospora NCBITaxon:2063 |
LOTUS | DOI:10.1021/ACS.ORGLETT.0C03565 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002370 | Actinomadura graeca NCBITaxon:2750812 |
CLUSTER_CORRELATED | genbank:CP059572.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
Explore across X-Mech
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002370 | MIBIG | 2 |
This page is generated from data/natural_products/amino_acids_and_peptides/zelkovamycin-e.yaml, which is generated from the committed inventories. Neither is edited by hand.