2-deoxystreptamine
naturalproductmech:mibig-b2d59bc0f8 MINTED SEEDED
Structure
| Standard InChIKey | DTFAJAKTSMLKAT-UHFFFAOYSA-N |
|---|---|
| SMILES | C1C(C(C(C(C1N)O)O)O)N |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:98959 |
Filing pathway
Carbohydrates — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Micromonospora echinospora NCBITaxon:1877 |
SOURCE_ASSERTION | mibig:BGC0000689 | PMID:14757238 |
Occurrences 3
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces fradiae NCBITaxon:1906 |
LOTUS | DOI:10.1038/JA.2005.104 |
| Streptomyces lividans NCBITaxon:1916 |
LOTUS | DOI:10.1007/S10059-009-0080-5 |
| Streptomyces kanamyceticus NCBITaxon:1967 |
LOTUS | DOI:10.1007/S10059-009-0080-5 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000689 | Micromonospora echinospora NCBITaxon:1877 |
CLUSTER_UNSTATED | genbank:AJ575934.3 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000689 | MIBIG | 3 |
This page is generated from data/natural_products/carbohydrates/2-deoxystreptamine.yaml, which is generated from the committed inventories. Neither is edited by hand.