amicetin
naturalproductmech:mibig-929635ea3f MINTED SEEDED
Structure
| Standard InChIKey | HDNVYHWHCVTDIV-ZENIWSRCSA-N |
|---|---|
| SMILES | C[C@H]1O[C@H](CC[C@@H]1O[C@H]1O[C@H](C)[C@H]([C@H](O)[C@H]1O)N(C)C)N1C=CC(NC(=O)C2=CC=C(NC(=O)[C@@](C)(N)CO)C=C2)=NC1=O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA02444, pubchem:221187 |
Filing pathway
Carbohydrates — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces vinaceusdrappus NCBITaxon:67376 |
BGC_CHARACTERIZED | mibig:BGC0000953 | PMID:22267658 |
Occurrences 4
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces plicatus NCBITaxon:1922 |
LOTUS | DOI:10.1021/JO01056A006 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1021/JO01056A006 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1128/AEM.07185-11 |
| Streptomyces vinaceusdrappus NCBITaxon:67376 |
LOTUS | DOI:10.1128/AEM.07185-11 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000953 | Streptomyces vinaceusdrappus NCBITaxon:67376 |
CLUSTER_DEMONSTRATED | genbank:HM748814.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000953 | MIBIG | 5 |
This page is generated from data/natural_products/carbohydrates/amicetin.yaml, which is generated from the committed inventories. Neither is edited by hand.