caprazamycin aglycon
naturalproductmech:mibig-550d894c33 MINTED SEEDED
Structure
| Standard InChIKey | CPXVFWXTEIXJRT-XENBJVMTSA-N |
|---|---|
| SMILES | O[C@@H]([C@H]1O)[C@@H](CN)O[C@H]1O[C@H](C2[C@@H](O)[C@@H](O)[C@H](N3C=CC(NC3=O)=O)O2)[C@H]4C(N(C)[C@H](C(O)=O)[C@@H](OC(CC(CCCCCCCCCCCCCC)OC(C[C@@H](CC(O)=O)C)=O)=O)CN4C)=O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Carbohydrates — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. MK730-62F2 NCBITaxon:643403 |
BGC_CHARACTERIZED | mibig:BGC0000875 | PMID:19351877 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000875 | Streptomyces sp. MK730-62F2 NCBITaxon:643403 |
CLUSTER_DEMONSTRATED | genbank:FJ490409.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000875 | MIBIG | 4 |
This page is generated from data/natural_products/carbohydrates/caprazamycin-aglycon.yaml, which is generated from the committed inventories. Neither is edited by hand.