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IC202C

CHEBI:66067 EXACT REVIEWED antimicrobial unspecified

What these status tags mean

Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.

Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.

An aldoxime isolated from Streptoalloteichus sp.1454-19. It is a siderophore which exhibits immunosuppressive activity on a mixed lymphocyte culture reaction (MLCR).

Structure

Standard InChIKeyRPHCJSPQKSVBSH-UHFFFAOYSA-N
SMILES[H]C(CCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN)=NO
Stereochemistryfully defined

Filing pathway

Fatty acids — computed by NPClassifier npclassifier.gnps2.org@2026-10-31, which is why it is pinned rather than recomputed.

Producer organisms 1

A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.

TaxonBasisClusterEvidence
Streptoalloteichus
Strain: 1454-19
NCBITaxon:44103
AXENIC_CULTURE
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Isolation, structural elucidation, and iron-chelating characterization of the linear N-hydroxycadaverine-succinyl dihydroxamate aldoxime siderophore congener IC202C from Streptoalloteichus sp. 1454-19.

Occurrences 1

Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.

TaxonSourceReference
Streptoalloteichus
NCBITaxon:44103
CHEBI PMID:10726924

Biosynthesis curated

Written by a curator with claim-level evidence on each step; not derived from a source. This is what the rest of the record exists to support.

StepEnzymeReactionSubstrate → productEvidence
1 Streptoalloteichus NIS hydroxamate siderophore synthetase pathway CHEBI:18127 + CHEBI:50440 + CHEBI:50443 → CHEBI:66067 PMID:10726924

Step 1: Assembly of the linear dihydroxamate backbone from two N-(3-carboxypropanoyl)-N-hydroxycadaverine units condensed with a terminal 5-(hydroxyimino)pentylamine (aldoxime) unit in Streptoalloteichus sp. 1454-19 to yield IC202C.

Mechanism & Biosynthesis Overview

PRODUCERS & OCCURRENCE 1 producer (1 causal) 1 cited occurrence BIOSYNTHETIC LOCUS 0 gene clusters 1 curated pathway step NATURAL PRODUCT IC202C CHEBI:66067 Fatty acids TARGETS & BIOACTIVITY 1 molecular target 0 bioactivities · 1 graph

Causal graph — bioactivity 7 nodes, 6 edges

Biosynthesis of the linear dihydroxamate aldoxime siderophore congener IC202C in Streptoalloteichus sp. 1454-19, chelation of Fe(III), and inhibition of T-cell proliferation.

SubjectPredicateObjectNotesEvidence
cadaverine converted_to N-hydroxycadaverine N-hydroxylation of cadaverine.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    IC202C shares the N-hydroxycadaverine-succinyl core with IC202A and IC202B.
N-hydroxycadaverine converted_to N-(3-carboxypropanoyl)-N-hydroxycadaverine Succinylation generates N-(3-carboxypropanoyl)-N-hydroxycadaverine.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    NMR elucidation of IC202C.
N-(3-carboxypropanoyl)-N-hydroxycadaverine substrate_of IC202 NIS siderophore synthetase Condensed into the dihydroxamate scaffold capped by a terminal aldoxime group.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Structure elucidation of IC202C.
IC202 NIS siderophore synthetase synthesizes IC202C Produces IC202C in Streptoalloteichus sp. 1454-19.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Isolation of IC202C from Streptoalloteichus sp. 1454-19.
IC202C chelates iron(3+) Coordinates ferric iron(3+) via the hydroxamate and aldoxime donor groups.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Siderophore iron-chelating activity of IC202C.
IC202C inhibits cell population proliferation Inhibits mixed lymphocyte culture proliferation (IC50 = 1.6 ug/mL) via iron chelation.
PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Biological activity of IC202C in mixed lymphocyte reaction.

Every edge carries its own citation; an uncited edge is refused by the corpus tests.

Molecular targets 1

TargetTarget organismMeasurementEvidence
iron(3+)
OTHER BINDS

Coordination of ferric iron(3+) via the two N-hydroxycadaverine-succinyl hydroxamate groups and terminal aldoxime moiety of IC202C.

PMID:10726924
  • reference
    PMID:10726924
    evidence type
    PRIMARY_EXPERIMENT
    notes
    Isolation, structural elucidation, and ferric iron-binding / immunosuppressive characterization of the aldoxime-hydroxamate siderophore IC202C from Streptoalloteichus sp. 1454-19.

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Provenance

Source conceptSourceVersion
CHEBI:66067CHEBI3-star

This page is generated from data/natural_products/fatty_acids/ic202c.yaml, which is generated from the committed inventories. Neither is edited by hand.