Abyssomicin 4
naturalproductmech:mibig-d817d6f62a MINTED SEEDED
Structure
| Standard InChIKey | ZKEUCRCOSHYEPI-DDODTQTESA-N |
|---|---|
| SMILES | C[C@H]1C[C@@]23OC(=O)C4=C2O[C@]1(C)[C@@H](O)[C@@H]3[C@H](O)CC(=O)[C@H](C)CCC4=O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA028395 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces koyangensis NCBITaxon:188770 |
SOURCE_ASSERTION | mibig:BGC0001694 | url:https://doi.org/10.1016/j.tet.2017.07.034 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.1021/OL503349Y |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001694 | Streptomyces koyangensis NCBITaxon:188770 |
CLUSTER_UNSTATED | genbank:MG243704.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001694 | MIBIG | 4 |
This page is generated from data/natural_products/polyketides/abyssomicin-4.yaml, which is generated from the committed inventories. Neither is edited by hand.