abyssomicin X
naturalproductmech:mibig-d3aaf5befd MINTED SEEDED
Structure
| Standard InChIKey | JOZRZQMZAIQZPI-MAANMWGLSA-N |
|---|---|
| SMILES | C[C@@H]1C[C@]2([C@@H](C=C1C)/C=C/C(=O)O)C(=C(C(=O)O2)C(=O)[C@@H](C)CC(=O)C)O |
| Stereochemistry | fully defined |
| Cross-references | pubchem:132967548 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. LC-6-2 NCBITaxon:1676287 |
SOURCE_ASSERTION | mibig:BGC0001492 | PMID:28358212 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.1021/ACS.JNATPROD.7B00108 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001492 | Streptomyces sp. LC-6-2 NCBITaxon:1676287 |
CLUSTER_UNSTATED | genbank:KY432814.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001492 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/abyssomicin-x.yaml, which is generated from the committed inventories. Neither is edited by hand.