cinerubin B
naturalproductmech:mibig-80ef61b944 MINTED SEEDED
Structure
| Standard InChIKey | ZBDDFHXUDIPRSM-DQCCILMQSA-N |
|---|---|
| SMILES | [H][C@]12C[C@H](O[C@@H]3[C@H](C)O[C@H](C[C@@H]3N(C)C)O[C@H]3C[C@](O)(CC)[C@H](C(=O)OC)C4=CC5=C(C(O)=C34)C(=O)C3=C(O)C=CC(O)=C3C5=O)O[C@@H](C)[C@@]1([H])O[C@]1([H])O[C@@H](C)C(=O)C[C@]1([H])O2 |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA019994 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. SPB074 NCBITaxon:465543 |
SOURCE_ASSERTION | mibig:BGC0000212 | PMID:24191063 |
Occurrences 13
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.1002/CBER.19590920820 |
| Streptomyces griseoruber NCBITaxon:1943 |
LOTUS | DOI:10.1271/BBB.110251 |
| Streptomyces griseoruber NCBITaxon:1943 |
LOTUS | DOI:10.7164/ANTIBIOTICS.33.49 |
| Streptomyces galilaeus NCBITaxon:33899 |
LOTUS | DOI:10.7164/ANTIBIOTICS.34.951 |
| Streptomyces eurythermus NCBITaxon:42237 |
LOTUS | DOI:10.7164/ANTIBIOTICS.45.1599 |
| Streptomyces griseorubiginosus NCBITaxon:67304 |
LOTUS | DOI:10.1271/BBB.110251 |
| Streptomyces griseorubiginosus NCBITaxon:67304 |
LOTUS | DOI:10.7164/ANTIBIOTICS.33.49 |
| Streptomyces melanogenes NCBITaxon:67326 |
LOTUS | DOI:10.1271/BBB.110251 |
| Streptomyces melanogenes NCBITaxon:67326 |
LOTUS | DOI:10.7164/ANTIBIOTICS.33.49 |
| Streptomyces noboritoensis NCBITaxon:67337 |
LOTUS | DOI:10.1271/BBB.110251 |
| Streptomyces noboritoensis NCBITaxon:67337 |
LOTUS | DOI:10.7164/ANTIBIOTICS.33.49 |
| Streptomyces tauricus NCBITaxon:68274 |
LOTUS | DOI:10.1271/BBB.110251 |
| Streptomyces tauricus NCBITaxon:68274 |
LOTUS | DOI:10.7164/ANTIBIOTICS.33.49 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000212 | Streptomyces sp. SPB074 NCBITaxon:465543 |
CLUSTER_UNSTATED | genbank:GG770539.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000212 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/cinerubin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.