colabomycin E
naturalproductmech:mibig-7163dcc196 MINTED SEEDED
Structure
| Standard InChIKey | UQUWECQGNYCQSQ-MRNGIOIPSA-N |
|---|---|
| SMILES | O=C(NC1=C[C@](/C=C/C=C/C=C/C=C/C(NC2=C(O)CCC2=O)=O)(O)C3C(O3)C1=O)/C=C/C=C/C=C/C=C\C=C\C |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces aureus NCBITaxon:193461 |
BGC_CHARACTERIZED | mibig:BGC0000213 | PMID:24838618 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces aureus NCBITaxon:193461 |
LOTUS | DOI:10.1002/CBIC.201400068 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000213 | Streptomyces aureus NCBITaxon:193461 |
CLUSTER_DEMONSTRATED | genbank:KF850685.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000213 | MIBIG | 4 |
This page is generated from data/natural_products/polyketides/colabomycin-e.yaml, which is generated from the committed inventories. Neither is edited by hand.