crocacin
naturalproductmech:mibig-5005ff3a20 MINTED SEEDED
Structure
| Standard InChIKey | XHTUDGVBJDVOEZ-WKRSYQPHSA-N |
|---|---|
| SMILES | COC(\C=C\C1=CC=CC=C1)C(C)C(OC)C(C)\C=C\C(\C)=C\C(=O)N\C=C/C\C=C/C(=O)NCC(=O)OC |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA011357, pubchem:6476008 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Chondromyces crocatus NCBITaxon:52 |
SOURCE_ASSERTION | mibig:BGC0000974 | PMID:24981773 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Chondromyces crocatus NCBITaxon:52 |
LOTUS | DOI:10.7164/ANTIBIOTICS.47.875 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000974 | Chondromyces crocatus NCBITaxon:52 |
CLUSTER_UNSTATED | genbank:FN547928.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000974 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/crocacin.yaml, which is generated from the committed inventories. Neither is edited by hand.