epemicin B
naturalproductmech:mibig-30cb089bda MINTED SEEDED
Structure
| Standard InChIKey | VNZWETIARFTEAV-GZNXHPRQSA-N |
|---|---|
| SMILES | CC[C@H](O[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1)[C@H](C)[C@H](O)[C@H](C=C[C@@H]1CC=C(C)[C@@H](O)[C@@H](C)[C@H](O)C[C@@H](O)[C@@H](C)[C@H](O)C[C@@H]2C[C@H](O)[C@@H](O)[C@](O)(C[C@@H](O[C@@H]3O[C@H](C)[C@@H](O)[C@H](O[C@H]4C[C@@H](N)[C@H](O)[C@@H](C)O4)[C@H]3O[C@@H]3O[C@H](C)[C@@H](O)[C@H](O)[C@H]3O)[C@@H](C)C=C[C@@H](O)C[C@@H](O)[C@@H](C)C=CC(=O)O1)O2)CC |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA033171 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Kutzneria sp. CA-103260 NCBITaxon:2802641 |
BGC_CHARACTERIZED | mibig:BGC0002349 | PMID:34279911 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Kutzneria NCBITaxon:43356 |
LOTUS | DOI:10.1021/ACSCHEMBIO.1C00318 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002349 | Kutzneria sp. CA-103260 NCBITaxon:2802641 |
CLUSTER_DEMONSTRATED | genbank:CP073318.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002349 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/epemicin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.