erythromycin D
CHEBI:28331 EXACT SEEDED antimicrobial unspecified
Structure
| Standard InChIKey | CLQUUOKNEOQBSW-KEGKUKQHSA-N |
|---|---|
| SMILES | CC[C@@H]1[C@@H]([C@@H]([C@H](C(=O)[C@@H](C[C@@]([C@@H]([C@H]([C@@H]([C@H](C(=O)O1)C)O[C@H]2C[C@@]([C@H]([C@@H](O2)C)O)(C)O)C)O[C@H]3[C@@H]([C@H](C[C@H](O3)C)N(C)C)O)(C)O)C)C)O)C |
| Stereochemistry | fully defined |
| Cross-references | pubchem:24755489 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Saccharopolyspora erythraea NRRL 2338 NCBITaxon:405948 |
BGC_CHARACTERIZED | mibig:BGC0000055 | PMID:11336289 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000055 | Saccharopolyspora erythraea NRRL 2338 NCBITaxon:405948 |
CLUSTER_DEMONSTRATED | genbank:AM420293.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Elsewhere in the fleet
- AntibioticMech — CHEBI:28331 (same structure, same inchikey)
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000055 | MIBIG | 5 |
| CHEBI:28331 | CHEBI | 3-star |
This page is generated from data/natural_products/polyketides/erythromycin-d.yaml, which is generated from the committed inventories. Neither is edited by hand.