eurocidin D
naturalproductmech:mibig-8117adfb07 MINTED SEEDED
Structure
| Standard InChIKey | ISJFQHRNXXQEGT-VYCLUTOCSA-N |
|---|---|
| SMILES | CCC(C)C1C/C=C/C=C\C=C/C=C\C=C\C(CC2C(C(CC(O2)(CC(C(CCC(=O)CC(CC(=O)O1)O)O)O)O)O)C(=O)O)O[C@H]3[C@H]([C@H]([C@@H]([C@H](O3)C)O)N)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:6444003, npatlas:NPA021319 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces eurocidicus ATCC 27428 NCBITaxon:66423 |
BGC_CORRELATED | mibig:BGC0002104 | PMID:13286189 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces eurocidicus NCBITaxon:66423 |
LOTUS | DOI:10.7164/ANTIBIOTICS.43.462 |
| Streptomyces eurocidicus NCBITaxon:66423 |
LOTUS | DOI:10.7164/ANTIBIOTICS.43.470 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002104 | Streptomyces eurocidicus ATCC 27428 NCBITaxon:66423 |
CLUSTER_CORRELATED | genbank:NZ_LGUI01000004.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002104 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/eurocidin-d.yaml, which is generated from the committed inventories. Neither is edited by hand.