F9775A
naturalproductmech:mibig-1a2493f8d7 MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | KEHZWGZVOZXIKE-UHFFFAOYSA-N |
|---|---|
| SMILES | CC1=CC2=C(C(=C1)O)OC3=C(O2)C4(C5C(=CC(=O)C5(C(=O)C4=C(C3=O)O)O)C)C |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:9843671 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Aspergillus nidulans FGSC A4 NCBITaxon:227321 |
BGC_CHARACTERIZED | mibig:BGC0000057 | PMID:20174687 |
Occurrences 3
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Aspergillus nidulans NCBITaxon:162425 |
LOTUS | DOI:10.1039/B904541D |
| Aspergillus nidulans NCBITaxon:162425 |
LOTUS | DOI:10.1073/PNAS.0901870106 |
| Escherichia coli NCBITaxon:562 |
LOTUS | DOI:10.1073/PNAS.0901870106 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000057 | Aspergillus nidulans FGSC A4 NCBITaxon:227321 |
CLUSTER_DEMONSTRATED | genbank:AACD01000135.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Biosynthesis curated
Written by a curator with claim-level evidence on each step; not derived from a source. This is what the rest of the record exists to support.
| Step | Enzyme | Reaction | Substrate → product | Evidence |
|---|---|---|---|---|
| 1 | OrsA UniProtKB:Q5AUX1 |
RHEA:62973 | ungrounded → CHEBI:16162 | DOI:10.1039/b904541d |
| 2 | OrsB/OrsC F-9775 tailoring module | ungrounded → naturalproductmech:mibig-1a2493f8d7 | DOI:10.1039/b904541d |
Step 1: This curates the Aspergillus nidulans FGSC A4 non-reducing polyketide synthase OrsA from the BGC0000057/AACD01000135.1 route; OrsA condenses acetyl-CoA with three malonyl-CoA units to form o-orsellinate, the branch precursor for F-9775 A biosynthesis.
Step 2: This curates the genetically supported OrsB/OrsC branch that diverts the OrsA orsellinic acid product toward F-9775 A and B. The exact isolated substrate, intermediates and individual OrsB and OrsC reactions remain unresolved, so this two-protein step is marked proposed and leaves enzyme_id empty.
Mechanism & Biosynthesis Overview
Causal graph — biosynthesis 8 nodes, 7 edges
Partial Aspergillus nidulans F-9775 A biosynthesis graph for OrsA orsellinate formation and the OrsB/OrsC-dependent F-9775 branch.
| Subject | Predicate | Object | Notes | Evidence |
|---|---|---|---|---|
| acetyl-CoA(4-) | is condensed by | OrsA | RHEA:62973 selects acetyl-CoA as the starter unit in the OrsA o-orsellinate synthase reaction. | DOI:10.1039/b904541d |
| malonyl-CoA(5-) | is condensed by | OrsA | RHEA:62973 consumes three malonyl-CoA units per o-orsellinate formed by OrsA. | DOI:10.1039/b904541d |
| OrsA | forms | o-orsellinate | The curated Rhea reaction forms o-orsellinate, which enters the OrsB/OrsC-dependent F-9775 branch. | DOI:10.1039/b904541d |
| o-orsellinate | feeds | OrsB/OrsC F-9775 tailoring | AN7911.4 and AN7912.4 deletions still produced orsellinic acid but failed to produce F-9775 A and B, placing the genetically supported OrsB/OrsC branch downstream of the OrsA product. | DOI:10.1039/b904541d |
| OrsB | is required for | OrsB/OrsC F-9775 tailoring | Deleting AN7911.4/orsB abolished F-9775 A and B production while leaving orsellinic acid production intact. | DOI:10.1039/b904541d |
| OrsC | is required for | OrsB/OrsC F-9775 tailoring | Deleting AN7912.4/orsC abolished F-9775 A and B production while leaving orsellinic acid production intact. | DOI:10.1039/b904541d |
| OrsB/OrsC F-9775 tailoring | forms | F9775A | Sanchez et al. genetically delimited the F-9775 A/B branch to OrsA plus OrsB and OrsC, but the exact F-9775 A-specific sequence of tailoring reactions remains unresolved. | DOI:10.1039/b904541d |
Every edge carries its own citation; an uncited edge is refused by the corpus tests.
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Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000057 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/f9775a.yaml, which is generated from the committed inventories. Neither is edited by hand.