flexirubin
naturalproductmech:mibig-236ff619a0 MINTED SEEDED
Structure
| Standard InChIKey | GFNJWVBJKYYUIN-CMUOTRNOSA-N |
|---|---|
| SMILES | CCCCCCCCCCCCC1=C(C=C(C=C1OC(=O)/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C2=CC(=C(C=C2)O)C)C)O |
| Stereochemistry | fully defined |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Flavobacterium johnsoniae UW101 NCBITaxon:376686 |
SOURCE_ASSERTION | mibig:BGC0000838 | PMID:19717629 |
Occurrences 3
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Chitinophaga pinensis NCBITaxon:79329 |
LOTUS | DOI:10.1111/1751-7915.12110 |
| Flavobacterium johnsoniae NCBITaxon:986 |
LOTUS | DOI:10.1128/AEM.01495-09 |
| Eisenibacter elegans NCBITaxon:997 |
LOTUS | DOI:10.1016/S0040-4039(01)92291-9 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000838 | Flavobacterium johnsoniae UW101 NCBITaxon:376686 |
CLUSTER_UNSTATED | genbank:CP000685.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000838 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/flexirubin.yaml, which is generated from the committed inventories. Neither is edited by hand.