gaudimycin D
naturalproductmech:mibig-c79c75d2cc MINTED SEEDED
Structure
| Standard InChIKey | PPOMLWFLRKCABK-YQDWXIMQSA-N |
|---|---|
| SMILES | O=C1C2=C(C=CC(C[C@](C)(O[C@@H]3O[C@H](C)[C@@H](N)CC3)CC(O)=O)=C2O)C(C4=C(O)C=CC=C41)=O |
| Stereochemistry | fully defined |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. PGA64 NCBITaxon:161235 |
BGC_CORRELATED | mibig:BGC0000262 | PMID:12654660 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.1016/J.YMBEN.2014.12.006 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000262 | Streptomyces sp. PGA64 NCBITaxon:161235 |
CLUSTER_DEMONSTRATED | genbank:AY034378.2 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000262 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/gaudimycin-d.yaml, which is generated from the committed inventories. Neither is edited by hand.