jadomycin
naturalproductmech:mibig-feb0474bb8 MINTED SEEDED
Structure
| Standard InChIKey | AVMSKCRHMKXYOO-RCAPREFBSA-N |
|---|---|
| SMILES | [H][C@@]12OC(=O)[C@]([H])(C(C)CC)N1C1=C(C(=O)C3=CC=CC(O)=C3C1=O)C1=C(O)C=C(C)C=C21 |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA018705, pubchem:443806 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces venezuelae ATCC 10712 NCBITaxon:953739 |
SOURCE_ASSERTION | mibig:BGC0000234 | PMID:7881555 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces venezuelae NCBITaxon:54571 |
LOTUS | DOI:10.1016/0040-4039(91)80152-V |
| Streptomyces venezuelae NCBITaxon:54571 |
LOTUS | DOI:10.3389/FMICB.2017.00432 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000234 | Streptomyces venezuelae ATCC 10712 NCBITaxon:953739 |
CLUSTER_UNSTATED | genbank:AF126429.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000234 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/jadomycin.yaml, which is generated from the committed inventories. Neither is edited by hand.