labrenzin
naturalproductmech:mibig-42b01245df MINTED SEEDED
Structure
| Standard InChIKey | RYMNJJUXEZDWPS-FQZCGRDXSA-N |
|---|---|
| SMILES | C[C@H]1[C@H](O[C@](CC1=C)([C@@H](C(=O)N[C@H]([C@@H]2C[C@H](C([C@H](O2)C[C@@H](CO)OC)(C)C)O)OC)O)OC)C |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA022395 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Labrenzia sp. PHM005 NCBITaxon:2590016 |
BGC_CHARACTERIZED | mibig:BGC0002068 | PMID:31787953 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Labrenzia NCBITaxon:478070 |
LOTUS | DOI:10.1021/ACS.JNATPROD.7B00408 |
| Labrenzia NCBITaxon:478070 |
LOTUS | DOI:10.3389/FMICB.2019.02561 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002068 | Labrenzia sp. PHM005 NCBITaxon:2590016 |
CLUSTER_DEMONSTRATED | genbank:CP041191.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002068 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/labrenzin.yaml, which is generated from the committed inventories. Neither is edited by hand.