lobatamide A
naturalproductmech:mibig-b95c81b56c MINTED SEEDED
Structure
| Standard InChIKey | JYHIHHYYXXKTTJ-VPIXAGKESA-N |
|---|---|
| SMILES | CO/N=C/C=C\C(=O)N/C=C/CC1CC(=O)OC(C)/C=C/C(O)/C(C)=C\CC2=C(C(=O)O1)C(O)=CC=C2 |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:10505925, npatlas:NPA028537 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Gynuella sunshinyii YC6258 NCBITaxon:1445510 |
SOURCE_ASSERTION | mibig:BGC0002046 | DOI:10.1002/anie.201916005 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Gynuella sunshinyii NCBITaxon:1445505 |
LOTUS | DOI:10.1002/ANIE.201916005 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002046 | Gynuella sunshinyii YC6258 NCBITaxon:1445510 |
CLUSTER_DEMONSTRATED | genbank:CP007142.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002046 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/lobatamide-a.yaml, which is generated from the committed inventories. Neither is edited by hand.