lobophorin B
naturalproductmech:mibig-fa6680e360 MINTED SEEDED
Structure
| Standard InChIKey | GRVIKFGPGUQNHQ-OZRRPFOLSA-N |
|---|---|
| SMILES | [H][C@@]12C=C[C@]3([H])C(C)=CCC(O[C@H]4C[C@](C)([C@H](NC(=O)OC)[C@H](C)O4)N(=O)=O)C(C)=C[C@@H]4C=C(CO)[C@@H](C)CC44OC(=O)C(=C4O)C(=O)[C@]3(C)[C@@]1([H])[C@H](C)C[C@@H](C)[C@H]2O[C@@H]1C[C@@H](O[C@@H]2C[C@@H](O)[C@@H](O[C@@H]3C[C@@H](O)[C@@H](OC)[C@H](C)O3)[C@H](C)O2)[C@@H](O)[C@H](C)O1 |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA011650, pubchem:44566672 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. SCSIO 01127 NCBITaxon:1035052 |
BGC_CHARACTERIZED | mibig:BGC0001004 | PMID:23868295 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001004 | Streptomyces sp. SCSIO 01127 NCBITaxon:1035052 |
CLUSTER_DEMONSTRATED | genbank:KC013978.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001004 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/lobophorin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.