medermycin
naturalproductmech:mibig-d4a6687eb8 MINTED SEEDED
Structure
| Standard InChIKey | NWPHOPMRDKFXFP-SIPAFCNMSA-N |
|---|---|
| SMILES | C[C@@H]1[C@H]([C@@H](CC(O1)C2=CC3=C(C=C2)C(=O)C4=C(C3=O)[C@H](O[C@H]5[C@@H]4OC(=O)C5)C)N(C)C)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:3035536 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. AM-7161 NCBITaxon:221710 |
SOURCE_ASSERTION | mibig:BGC0000245 | PMID:12855716 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.1099/MIC.0.26310-0 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000245 | Streptomyces sp. AM-7161 NCBITaxon:221710 |
CLUSTER_UNSTATED | genbank:AB103463.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000245 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/medermycin.yaml, which is generated from the committed inventories. Neither is edited by hand.