oronofacic acid
naturalproductmech:mibig-44e8a59293 MINTED SEEDED
Structure
| Standard InChIKey | ONMAUQRMJXNSCG-VGMNWLOBSA-N |
|---|---|
| SMILES | [H][C@]12CCC(=O)[C@@]1([H])C[C@@H](CC)C=C2C(O)=O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA013714 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas syringae NCBITaxon:317 |
SOURCE_ASSERTION | mibig:BGC0000041 | PMID:9860992 |
Occurrences 5
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces scabiei NCBITaxon:1930 |
LOTUS | DOI:10.1094/MPMI-09-14-0255-R |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1016/S0031-9422(00)81049-3 |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1016/S0031-9422(00)85028-1 |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1021/JA9536330 |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1073/PNAS.95.26.15469 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000041 | Pseudomonas syringae NCBITaxon:317 |
CLUSTER_UNSTATED | genbank:AF098795.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000041 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/oronofacic-acid.yaml, which is generated from the committed inventories. Neither is edited by hand.