palmerolide H
naturalproductmech:mibig-a46a52da5c MINTED SEEDED
Structure
| Standard InChIKey | VKRXGBUTDVKCIK-XTMPFRGYSA-N |
|---|---|
| SMILES | C=C(C)C/C(C)=C\C(=O)N/C=C/C(C)=C/[C@@H](C)[C@H]1C/C(C)=C/C=C/CC[C@H](OS(=O)(=O)O)/C=C\[C@@H](O)[C@@H](OC(N)=O)CCC/C=C/C(=O)O1 |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA033528 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Candidatus Synoicihabitans palmerolidicus NCBITaxon:2818510 |
SOURCE_ASSERTION | mibig:BGC0002119 | DOI:10.1016/j.bmc.2011.06.004 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002119 | Candidatus Synoicihabitans palmerolidicus NCBITaxon:2818510 |
CLUSTER_UNSTATED | genbank:JAGGDC010000008.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002119 | MIBIG | 3 |
This page is generated from data/natural_products/polyketides/palmerolide-h.yaml, which is generated from the committed inventories. Neither is edited by hand.