phomopsin A
naturalproductmech:mibig-c5f3fe1184 MINTED SEEDED
Structure
| Standard InChIKey | CWNWFRXFZISUQX-UHFFFAOYSA-N |
|---|---|
| SMILES | CCC1CCCCC(=O)C2=C(O1)C=C(C=C2CC(=O)OCC)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA002037 |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Phomopsis leptostromiformis NCBITaxon:291059 |
BGC_CHARACTERIZED | mibig:BGC0001398 | PMID:34608734 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Phomopsis NCBITaxon:34399 |
LOTUS | DOI:10.1016/J.PHYTOCHEM.2008.02.002 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001398 | Phomopsis leptostromiformis NCBITaxon:291059 |
CLUSTER_DEMONSTRATED | genbank:LC646903.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001398 | MIBIG | 2 |
This page is generated from data/natural_products/polyketides/phomopsin-a.yaml, which is generated from the committed inventories. Neither is edited by hand.