warkmycin CS2
naturalproductmech:mibig-5b017fce51 MINTED SEEDED
Structure
| Standard InChIKey | LNDXRPIAVUVECK-VQVSLIPMSA-N |
|---|---|
| SMILES | O=C1C(C(O)=C2[C@@H](C[C@@H](O[C@H]3C[C@]([C@H](O[C@@H]4O[C@@H]([C@H](CC4)OC(N)=O)C)[C@@H](C)O3)(C)O)[C@@H]5O)O[C@@H]5C)=C(C=C2)C(C6=C1[C@H](O)[C@H](OC(C)=O)[C@]([C@H](OC(C)=O)C(C)=C7)(O)[C@@]6(O)[C@@]7([H])O[C@H](C[C@@H](OC)[C@@H]8O)O[C@H]8C)=O |
| Stereochemistry | fully defined |
Filing pathway
Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, saccharide, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. CS057 NCBITaxon:1982764 |
BGC_CORRELATED | mibig:BGC0001438 | PMID:23860362 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.3389/FMICB.2018.00039 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001438 | Streptomyces sp. CS057 NCBITaxon:1982764 |
CLUSTER_CORRELATED | genbank:KZ195572.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001438 | MIBIG | 5 |
This page is generated from data/natural_products/polyketides/warkmycin-cs2.yaml, which is generated from the committed inventories. Neither is edited by hand.