lankacidin C
naturalproductmech:mibig-441a8c4d3f MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | ATDILMLBOZKFGI-JUTMVFGESA-N |
|---|---|
| SMILES | [H][C@]12C[C@]([H])(O)\C=C\C(\C)=C\C[C@]([H])(O)\C=C\C(\C)=C\[C@@]([H])(NC(=O)C(C)=O)[C@](C)(C(=O)O1)C(=O)[C@@H]2C |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA04098 |
Filing pathway
Terpenoids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces rochei NCBITaxon:1928 |
SOURCE_ASSERTION | mibig:BGC0001100 | PMID:12791134 |
Occurrences 12
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1002/CBIC.201500393 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1016/J.JBIOSC.2018.03.006 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1016/J.TET.2011.05.047 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1016/S0378-1119(00)00060-3 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1038/JA.2010.146 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1038/S41598-019-47406-Y |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1046/J.1365-2958.2003.03523.X |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1080/09168451.2014.882761 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1128/JB.01383-07 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.1271/BBB.90591 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.7164/ANTIBIOTICS.26.647 |
| Streptomyces rochei NCBITaxon:1928 |
LOTUS | DOI:10.7164/ANTIBIOTICS.47.1447 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001100 | Streptomyces rochei NCBITaxon:1928 |
CLUSTER_UNSTATED | genbank:AB088224.2 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
Explore across X-Mech
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001100 | MIBIG | 5 |
This page is generated from data/natural_products/terpenoids/lankacidin-c.yaml, which is generated from the committed inventories. Neither is edited by hand.