4-deoxygadusol
naturalproductmech:mibig-0d10efb888 MINTED SEEDED
Structure
| Standard InChIKey | ZONRIYAALKITGT-QMMMGPOBSA-N |
|---|---|
| SMILES | OC1=C(OC)C(C[C@](O)(CO)C1)=O |
| Stereochemistry | fully defined |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Trichormus variabilis ATCC 29413 NCBITaxon:240292 |
SOURCE_ASSERTION | mibig:BGC0000427 | PMID:20813918 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000427 | Trichormus variabilis ATCC 29413 NCBITaxon:240292 |
CLUSTER_DEMONSTRATED | genbank:CP000117.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000427 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/4-deoxygadusol.yaml, which is generated from the committed inventories. Neither is edited by hand.