clifednamide A
naturalproductmech:mibig-f121d32032 MINTED SEEDED
Structure
| Standard InChIKey | RKXLUXSTSOYJOS-ONSBZXJCSA-N |
|---|---|
| SMILES | C[C@@H]1C[C@@H]2[C@H]3C[C@H]4/C=C/C(=C5C(=O)[C@H](CCCNC(=O)/C=C/C[C@@H]4[C@H]3C=C[C@H]2[C@@H]1C(=O)C)NC5=O)O |
| Stereochemistry | fully defined |
| Cross-references | pubchem:102048821 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. JV178 NCBITaxon:858632 |
SOURCE_ASSERTION | mibig:BGC0001553 | PMID:29249153 |
Occurrences 6
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces neyagawaensis NCBITaxon:42238 |
LOTUS | DOI:10.1021/ACSSYNBIO.7B00349 |
| Streptomyces neyagawaensis NCBITaxon:42238 |
LOTUS | DOI:10.1128/GENOMEA.01401-17 |
| Streptomyces purpeofuscus NCBITaxon:67352 |
LOTUS | DOI:10.1021/ACSSYNBIO.7B00349 |
| Streptomyces purpeofuscus NCBITaxon:67352 |
LOTUS | DOI:10.1128/GENOMEA.01401-17 |
| Streptomyces torulosus NCBITaxon:68276 |
LOTUS | DOI:10.1021/ACSSYNBIO.7B00349 |
| Streptomyces torulosus NCBITaxon:68276 |
LOTUS | DOI:10.1128/GENOMEA.01401-17 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001553 | Streptomyces sp. JV178 NCBITaxon:858632 |
CLUSTER_UNSTATED | genbank:MF893273.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001553 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/clifednamide-a-2.yaml, which is generated from the committed inventories. Neither is edited by hand.