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Colletochlorin B

naturalproductmech:mibig-acacd19a98 MINTED SEEDED enzyme inhibitor

Grounding review: No 3-star ChEBI entry shares this structure, so the record keeps a content-hashed identifier.
What these status tags mean

Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.

Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.

Structure

Standard InChIKeyUEUMAXMCCDEOIJ-XYOKQWHBSA-N
SMILESCC1=C(C(=C(C(=C1Cl)O)C/C=C(\C)/CCC=C(C)C)O)C=O
Stereochemistryfully defined
Cross-referencespubchem:6439644, chembl:CHEMBL4294528

Filing pathway

Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, terpene, from MIBiG.

Producer organisms 1

A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.

TaxonBasisClusterEvidence
Colletotrichum higginsianum IMI 349063
NCBITaxon:759273
BGC_CORRELATED mibig:BGC0002812 DOI:10.1016/j.ymben.2023.10.002

Occurrences 2

Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.

TaxonSourceReference
Neonectria ditissima
NCBITaxon:78410
LOTUS DOI:10.1021/JF051021L
Nigrosabulum globosum
NCBITaxon:95328
LOTUS DOI:10.1021/NP000547R

Biosynthetic gene clusters 1

AccessionHostLocus evidenceGenome
mibig:BGC0002812 Colletotrichum higginsianum IMI 349063
NCBITaxon:759273
CLUSTER_CORRELATED genbank:LTAN01000004.1

A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.

Mechanism & Biosynthesis Overview

PRODUCERS & OCCURRENCE 1 producer (0 causal) 2 cited occurrences BIOSYNTHETIC LOCUS 1 gene cluster 0 curated pathway steps NATURAL PRODUCT Colletochlorin B naturalproductmech:mibig-acacd19a98 Unclassified TARGETS & BIOACTIVITY 0 molecular targets 3 bioactivities · 0 graphs

Bioactivities 3

Entries preserve source qualifiers, targets and evidence. Repeated assay names or values are not independent replications; inspect source detail for differences.

AssayResultTarget enzymeSource detail
Experimentally measured binding affinity data (IC50) for protein-ligand complexes derived from PDBIC50 0.0002 uM; ACTIVENot recorded
PMID:23487766
assay
Experimentally measured binding affinity data (IC50) for protein-ligand complexes derived from PDB
evidence
  • reference
    PMID:23487766
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 977608, deposited by Shanghai Institute of Organic Chemistry; assay type Other.
call
ACTIVE
measurement type
IC50
value
0.0002
units
uM
activity class
ENZYME_INHIBITOR
Inhibitory Effects on Recombinant AOX Protein from US Patent US11565996: "Compounds for use as inhibitors of alternative oxidase or cytochrome bc1 complex"IC50 0.515 uM; ACTIVEUniProtKB:P22185
pubchem.aid:1919245
assay
Inhibitory Effects on Recombinant AOX Protein from US Patent US11565996: "Compounds for use as inhibitors of alternative oxidase or cytochrome bc1 complex"
evidence
  • reference
    pubchem.aid:1919245
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1919245, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
0.515
units
uM
target enzyme
UniProtKB:P22185
activity class
ENZYME_INHIBITOR
Inhibitory Effects on Recombinant AOX Protein from US Patent US11565996: "Compounds for use as inhibitors of alternative oxidase or cytochrome bc1 complex"IC50 0.75 uM; ACTIVEUniProtKB:P22185
pubchem.aid:1919245
assay
Inhibitory Effects on Recombinant AOX Protein from US Patent US11565996: "Compounds for use as inhibitors of alternative oxidase or cytochrome bc1 complex"
evidence
  • reference
    pubchem.aid:1919245
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1919245, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
0.75
units
uM
target enzyme
UniProtKB:P22185
activity class
ENZYME_INHIBITOR

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Provenance

Source conceptSourceVersion
BGC0002812MIBIG2

This page is generated from data/natural_products/unclassified/colletochlorin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.