daptomycin
naturalproductmech:mibig-d4998c3d5b MINTED SEEDED
Structure
| Standard InChIKey | DOAKLVKFURWEDJ-QCMAZARJSA-N |
|---|---|
| SMILES | CCCCCCCCCC(=O)N[C@@H](CC1=CNC2=CC=CC=C21)C(=O)N[C@H](CC(=O)N)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H]3[C@H](OC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](NC(=O)CNC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)CNC3=O)CCCN)CC(=O)O)C)CC(=O)O)CO)[C@H](C)CC(=O)O)CC(=O)C4=CC=CC=C4N)C |
| Stereochemistry | fully defined |
| Cross-references | pubchem:21585658 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces filamentosus NRRL 11379 NCBITaxon:457430 |
SOURCE_ASSERTION | mibig:BGC0000336 | PMID:15870461 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces filamentosus NCBITaxon:67294 |
LOTUS | DOI:10.1099/MIC.0.27757-0 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000336 | Streptomyces filamentosus NRRL 11379 NCBITaxon:457430 |
CLUSTER_UNSTATED | genbank:AY787762.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000336 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/daptomycin.yaml, which is generated from the committed inventories. Neither is edited by hand.