didemnin X
naturalproductmech:mibig-5ac2e70945 MINTED SEEDED
Structure
| Standard InChIKey | BUHGEDVBBOQECR-HGESRAKOSA-N |
|---|---|
| SMILES | CCCCCCC[C@H](CC(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N(C)[C@H](CC(C)C)C(=O)N[C@H]2[C@@H](OC(=O)[C@@H](N(C(=O)[C@@H]3CCCN3C(=O)[C@@H](NC(=O)[C@H](C(=O)[C@@H](OC(=O)C[C@@H]([C@@H](NC2=O)[C@@H](C)CC)O)C(C)C)C)CC(C)C)C)CC4=CC=C(C=C4)OC)C)O |
| Stereochemistry | fully defined |
| Cross-references | pubchem:44592545 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Tistrella mobilis KA081020-065 NCBITaxon:1110502 |
SOURCE_ASSERTION | mibig:BGC0000985 | PMID:22458477 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Trididemnum solidum NCBITaxon:1079459 |
LOTUS | DOI:10.1021/JA00118A010 |
| Tistrella mobilis NCBITaxon:171437 |
LOTUS | DOI:10.1021/JA301735A |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000985 | Tistrella mobilis KA081020-065 NCBITaxon:1110502 |
CLUSTER_UNSTATED | genbank:CP003239.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000985 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/didemnin-x.yaml, which is generated from the committed inventories. Neither is edited by hand.