dkxanthene 556
naturalproductmech:mibig-71c6dd1658 MINTED SEEDED
Structure
| Standard InChIKey | JGWQTBBYPIXQNM-XUYNYAPBSA-N |
|---|---|
| SMILES | C[C@@H]1[C@@H](/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C=C(C(NC(C(O)=O)CC(N)=O)=O)\C)N=C(/C=C/C2=CC=CN2)O1 |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Stigmatella aurantiaca DW4/3-1 NCBITaxon:378806 |
SOURCE_ASSERTION | mibig:BGC0000986 | PMID:18721748 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Myxococcus xanthus NCBITaxon:34 |
LOTUS | DOI:10.1016/J.CHEMBIOL.2008.06.005 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000986 | Stigmatella aurantiaca DW4/3-1 NCBITaxon:378806 |
CLUSTER_UNSTATED | genbank:BN001209.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000986 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/dkxanthene-556.yaml, which is generated from the committed inventories. Neither is edited by hand.