nocardiopsin B
naturalproductmech:mibig-4408b5c322 MINTED SEEDED
Structure
| Standard InChIKey | RZDPHKIJDVDPKG-NNBRUCGZSA-N |
|---|---|
| SMILES | CCC(CC(C1(CC(C2CCC(O2)CC/C=C(\C(=O)C(CC/C=C/C(=O)N3CCCC[C@H]3C(=O)O1)C)/C)C)C)O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:46192154 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Nocardiopsis sp. CMB-M0232 NCBITaxon:1231934 |
SOURCE_ASSERTION | mibig:BGC0001195 | PMID:25755076 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001195 | Nocardiopsis sp. CMB-M0232 NCBITaxon:1231934 |
CLUSTER_UNSTATED | genbank:KP339942.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001195 | MIBIG | 3 |
This page is generated from data/natural_products/unclassified/nocardiopsin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.