orfamide A
naturalproductmech:mibig-6c0a49ca65 MINTED SEEDED
Structure
| Standard InChIKey | AFOLBAYDTRBYBA-MAUDZENVSA-N |
|---|---|
| SMILES | CCCCCCCCCCCC(O)CC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](CCC(O)=O)C(=O)N[C@@H]1[C@@H](C)OC(=O)[C@@H](NC(=O)[C@@H](CO)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](CO)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](NC1=O)C(C)CC)C(C)C |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA01606 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas protegens Pf-5 NCBITaxon:220664 |
BGC_CHARACTERIZED | mibig:BGC0000399 | PMID:17254952 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000399 | Pseudomonas protegens Pf-5 NCBITaxon:220664 |
CLUSTER_DEMONSTRATED | genbank:CP000076.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000399 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/orfamide-a.yaml, which is generated from the committed inventories. Neither is edited by hand.