rakicidin A
naturalproductmech:mibig-3fe2768896 MINTED SEEDED
Structure
| Standard InChIKey | NODOLTRBPIFGCQ-CEIJAINISA-N |
|---|---|
| SMILES | CN(CC(N[C@@H]([C@@H](C(N)=O)O)C(OC([C@H](C)CCCCCCCCCCCC(C)C)[C@H](C)C(N1)=O)=O)=O)C(/C=C/C1=C)=O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Micromonospora sp. M42 NCBITaxon:457406 |
SOURCE_ASSERTION | mibig:BGC0001328 | PMID:26637117 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001328 | Micromonospora sp. M42 NCBITaxon:457406 |
CLUSTER_UNSTATED | genbank:KK037233.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001328 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/rakicidin-a.yaml, which is generated from the committed inventories. Neither is edited by hand.