retimycin A
naturalproductmech:mibig-63bd8ae7bd MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | KDRVEKPMWVHCOU-UHFFFAOYSA-N |
|---|---|
| SMILES | O=C(NC1C(NC(C)C(N(C)C2C(N(C)C3(C(C)C3)C(OC(C)C(NC(C4=NC5=CC=CC=C5C=C4O)=O)C(NC(C)C(N(C)C(C(S(C)=O)SC2)C(N(C)C6(C(C)C6)C(OC1C)=O)=O)=O)=O)=O)=O)=O)=O)C7=NC8=CC=CC=C8C=C7O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Salinispora arenicola CNT005 NCBITaxon:1137255 |
SOURCE_ASSERTION | mibig:BGC0001228 | PMID:25865308 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001228 | Salinispora arenicola CNT005 NCBITaxon:1137255 |
CLUSTER_UNSTATED | genbank:NZ_KI911494.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
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Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001228 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/retimycin-a.yaml, which is generated from the committed inventories. Neither is edited by hand.