syringopeptin 25A
naturalproductmech:mibig-aa0393638b MINTED SEEDED
Structure
| Standard InChIKey | UMIOOXCZNZIVGY-KALDKNCFSA-N |
|---|---|
| SMILES | CCCCCCCC(CC(=N/C(=C\C)/C(=O)N1CCC[C@H]1C(=N[C@@H](C(C)C)C(=N[C@@H](C)C(=N[C@@H](C)C(=N[C@@H](C(C)C)C(=N[C@@H](CC(C)C)C(=N[C@@H](C)C(=N[C@@H](C)C(=N/C(=C\C)/C(=N[C@@H](C(C)C)C(=N/C(=C\C)/C(=N[C@@H](C)C(=N[C@@H](C(C)C)C(=N[C@@H](C)C(=N[C@@H](C)C(=N/C(=C\C)/C(=N[C@H]2C(OC(=O)[C@@H](N=C([C@@H](N=C([C@@H](N=C([C@@H](N=C([C@@H](N=C([C@@H](N=C([C@@H](N=C2O)CO)O)C)O)C(C)C)O)C)O)CCN)O)CCN)O)CC3=CC=C(C=C3)O)C)O)O)O)O)O)O)O)O)O)O)O)O)O)O)O)O)O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:101985870 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas syringae pv. syringae NCBITaxon:321 |
SOURCE_ASSERTION | mibig:BGC0000438 | PMID:11277431 |
Occurrences 3
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Pseudomonas NCBITaxon:286 |
LOTUS | DOI:10.1016/0014-5793(91)81115-O |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1016/0014-5793(91)81115-O |
| Pseudomonas syringae NCBITaxon:317 |
LOTUS | DOI:10.1094/MPMI.2001.14.3.336 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000438 | Pseudomonas syringae pv. syringae NCBITaxon:321 |
CLUSTER_UNSTATED | genbank:AF286216.2 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000438 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/syringopeptin-25a.yaml, which is generated from the committed inventories. Neither is edited by hand.