variobactin B
naturalproductmech:mibig-aaa481b62f MINTED SEEDED
Structure
| Standard InChIKey | VZLKLSFDPFHEHA-UHFFFAOYSA-N |
|---|---|
| SMILES | CCCCCCCCCC(=O)NC(CCCN(O)C(C)=O)C1OC(=O)C(CCCN(O)C(C)=O)NC(=O)C(CCCNC(N)=O)NC(=O)C(CCCN)NC(=O)C(CO)NC(=O)C(C(O)C(=O)O)NC(=O)C1C |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA032831 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Variovorax paradoxus NCBITaxon:34073 |
SOURCE_ASSERTION | mibig:BGC0002416 | PMID:26412281 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Variovorax paradoxus NCBITaxon:34073 |
LOTUS | DOI:10.1038/NCOMMS9421 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002416 | Variovorax paradoxus NCBITaxon:34073 |
CLUSTER_UNSTATED | genbank:KT362218.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002416 | MIBIG | 3 |
This page is generated from data/natural_products/unclassified/variobactin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.