woodybactin B
naturalproductmech:mibig-e5154b5ade MINTED SEEDED
Structure
| Standard InChIKey | SZXMZOUTLSMZRZ-ZDGMYTEDSA-N |
|---|---|
| SMILES | CC(C)CCCCCC(=O)N(O)CCCC[C@H](NC(=O)CC(O)(CC(=O)O)C(=O)O)C(=O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA031063 |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Shewanella woodyi ATCC 51908 NCBITaxon:392500 |
SOURCE_ASSERTION | mibig:BGC0002469 | PMID:31203087 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Shewanella woodyi NCBITaxon:60961 |
LOTUS | DOI:10.1016/J.JINORGBIO.2019.110736 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002469 | Shewanella woodyi ATCC 51908 NCBITaxon:392500 |
CLUSTER_UNSTATED | genbank:CP000961.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002469 | MIBIG | 2 |
This page is generated from data/natural_products/unclassified/woodybactin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.