xenoamicin B
naturalproductmech:mibig-fb28425c96 MINTED SEEDED
Structure
| Standard InChIKey | RCNSZSLZDQBOEM-YXEJCLQBSA-N |
|---|---|
| SMILES | O=C(N[C@H](C(N[C@H]([C@H](C)CC)C(N[C@@H](C(C)C)C(N[C@H](C)C(NCCC1=O)=O)=O)=O)=O)C(C)C)[C@@H]([C@H](OC([C@@H](NC([C@@H]2N1CCC2)=O)C(C)C)=O)C)NC([C@H]([C@H](C)CC)NC([C@@H](CC(C)C)NC([C@H](C(C)C)NC([C@@H](C)NC([C@H]3N(C(CCC)=O)CCC3)=O)=O)=O)=O)=O |
| Stereochemistry | fully defined |
Filing pathway
Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Xenorhabdus doucetiae NCBITaxon:351671 |
BGC_CHARACTERIZED | mibig:BGC0000464 | PMID:24203528 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Xenorhabdus doucetiae NCBITaxon:351671 |
LOTUS | DOI:10.1002/CHEM.201302481 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000464 | Xenorhabdus doucetiae NCBITaxon:351671 |
CLUSTER_DEMONSTRATED | genbank:FO704550.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000464 | MIBIG | 5 |
This page is generated from data/natural_products/unclassified/xenoamicin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.