L-valine biosynthesis
MetaCyc:VALSYN-PWY
L-valine biosynthesis condenses pyruvate to (2S)-2-acetolactate, reduces and rearranges it to (2R)-2,3-dihydroxy-3-methylbutanoate, dehydrates that intermediate to 3-methyl-2-oxobutanoate, and transaminates it to L-valine.
- Pathway type
- amino acid biosynthesis
- Organism scope
Pathway network
33 nodes · 44 asserted directed edges
Arrows show recorded subject → object relationships, not necessarily metabolic flow. Select a node for details or an arrow for evidence. Scroll, zoom or find a node to explore.
- Reaction / activity
- Chemical / cofactor
- Protein / complex
- Other participant
- Cell / process context
- Solid arrow: mechanistic relation
- Dashed arrow: membership, location or cofactor relation
Components and activities
| Node | Kind or role | Source direction |
|---|---|---|
Escherichia coliNCBITaxon:562 | taxon | |
acetolactate synthaseEC:2.2.1.6 | molecular activity | |
ketol-acid reductoisomerase (NADP(+))EC:1.1.1.86 | molecular activity | |
dihydroxy-acid dehydrataseEC:4.2.1.9 | molecular activity | |
branched-chain-amino-acid transaminaseEC:2.6.1.42 | molecular activity | |
pyruvateCHEBI:15361 | small molecule | |
H+CHEBI:15378 | small molecule | |
(2S)-2-acetolactateCHEBI:58476 | small molecule | |
CO2CHEBI:16526 | small molecule | |
NADPHCHEBI:57783 | small molecule | |
(2R)-2,3-dihydroxy-3-methylbutanoateCHEBI:49072 | small molecule | |
NADP(+)CHEBI:58349 | small molecule | |
3-methyl-2-oxobutanoateCHEBI:11851 | small molecule | |
H2OCHEBI:15377 | small molecule | |
L-glutamateCHEBI:29985 | small molecule | |
L-valineCHEBI:57762 | small molecule | |
2-oxoglutarateCHEBI:16810 | small molecule | |
Acetolactate synthase isozyme 3 large subunitUniProtKB:P00893 | protein | |
magnesium(2+)CHEBI:18420 | cofactor | |
thiamine(1+) diphosphate(3-)CHEBI:58937 | cofactor | |
Acetolactate synthase isozyme 3 small subunitUniProtKB:P00894 | protein | |
Dihydroxy-acid dehydrataseUniProtKB:P05791 | protein | |
iron-sulfur clusterCHEBI:30408 | cofactor | |
Ketol-acid reductoisomerase (NADP(+))UniProtKB:P05793 | protein | |
cytoplasmGO:0005737 | cellular component | |
Acetolactate synthase isozyme 1 large subunitUniProtKB:P08142 | protein | |
Branched-chain-amino-acid aminotransferaseUniProtKB:P0AB80 | protein | |
pyridoxal 5'-phosphate(2-)CHEBI:597326 | cofactor | |
Acetolactate synthase isozyme 1 small subunitUniProtKB:P0ADF8 | protein | |
Acetolactate synthase isozyme 2 small subunitUniProtKB:P0ADG1 | protein | |
acetolactate synthase reactionRHEA:25250 | reaction | left to right |
acetohydroxy acid isomeroreductase reactionRHEA:22070 | reaction | right to left |
dihydroxy-acid dehydratase reactionRHEA:24810 | reaction | left to right |
L-valine aminotransferase reactionRHEA:24815 | reaction | right to left |
Mechanistic edges
| Subject | Predicate and description | Object | Evidence |
|---|---|---|---|
pyruvateCHEBI:15361 | consumes | acetolactate synthase reactionRHEA:25250 |
|
H+CHEBI:15378 | consumes | acetolactate synthase reactionRHEA:25250 |
|
acetolactate synthase reactionRHEA:25250 | produces | CO2CHEBI:16526 |
|
acetolactate synthase reactionRHEA:25250 | produces | (2S)-2-acetolactateCHEBI:58476 |
|
H+CHEBI:15378 | consumes | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
NADPHCHEBI:57783 | consumes | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
(2S)-2-acetolactateCHEBI:58476 | consumes | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
acetohydroxy acid isomeroreductase reactionRHEA:22070 | produces | (2R)-2,3-dihydroxy-3-methylbutanoateCHEBI:49072 |
|
acetohydroxy acid isomeroreductase reactionRHEA:22070 | produces | NADP(+)CHEBI:58349 |
|
(2R)-2,3-dihydroxy-3-methylbutanoateCHEBI:49072 | consumes | dihydroxy-acid dehydratase reactionRHEA:24810 |
|
dihydroxy-acid dehydratase reactionRHEA:24810 | produces | 3-methyl-2-oxobutanoateCHEBI:11851 |
|
dihydroxy-acid dehydratase reactionRHEA:24810 | produces | H2OCHEBI:15377 |
|
3-methyl-2-oxobutanoateCHEBI:11851 | consumes | L-valine aminotransferase reactionRHEA:24815 |
|
L-glutamateCHEBI:29985 | consumes | L-valine aminotransferase reactionRHEA:24815 |
|
L-valine aminotransferase reactionRHEA:24815 | produces | 2-oxoglutarateCHEBI:16810 |
|
L-valine aminotransferase reactionRHEA:24815 | produces | L-valineCHEBI:57762 |
|
acetolactate synthaseEC:2.2.1.6 | catalyzes | acetolactate synthase reactionRHEA:25250 |
|
ketol-acid reductoisomerase (NADP(+))EC:1.1.1.86 | catalyzes | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
dihydroxy-acid dehydrataseEC:4.2.1.9 | catalyzes | dihydroxy-acid dehydratase reactionRHEA:24810 |
|
branched-chain-amino-acid transaminaseEC:2.6.1.42 | catalyzes | L-valine aminotransferase reactionRHEA:24815 |
|
acetohydroxy acid isomeroreductase reactionRHEA:22070 | precedes | dihydroxy-acid dehydratase reactionRHEA:24810 |
|
dihydroxy-acid dehydratase reactionRHEA:24810 | precedes | L-valine aminotransferase reactionRHEA:24815 |
|
acetolactate synthase reactionRHEA:25250 | precedes | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
Acetolactate synthase isozyme 3 large subunitUniProtKB:P00893 | enables | acetolactate synthase reactionRHEA:25250 |
|
L-valineCHEBI:57762 | inhibits | Acetolactate synthase isozyme 3 large subunitUniProtKB:P00893 |
|
Acetolactate synthase isozyme 3 large subunitUniProtKB:P00893 | has_cofactor | magnesium(2+)CHEBI:18420 |
|
Acetolactate synthase isozyme 3 large subunitUniProtKB:P00893 | has_cofactor | thiamine(1+) diphosphate(3-)CHEBI:58937 |
|
Acetolactate synthase isozyme 3 small subunitUniProtKB:P00894 | enables | acetolactate synthase reactionRHEA:25250 |
|
L-valineCHEBI:57762 | inhibits | Acetolactate synthase isozyme 3 small subunitUniProtKB:P00894 |
|
Dihydroxy-acid dehydrataseUniProtKB:P05791 | enables | dihydroxy-acid dehydratase reactionRHEA:24810 |
|
Dihydroxy-acid dehydrataseUniProtKB:P05791 | has_cofactor | iron-sulfur clusterCHEBI:30408 |
|
Dihydroxy-acid dehydrataseUniProtKB:P05791 | has_cofactor | magnesium(2+)CHEBI:18420 |
|
Ketol-acid reductoisomerase (NADP(+))UniProtKB:P05793 | enables | acetohydroxy acid isomeroreductase reactionRHEA:22070 |
|
Ketol-acid reductoisomerase (NADP(+))UniProtKB:P05793 | located_in | cytoplasmGO:0005737 |
|
Ketol-acid reductoisomerase (NADP(+))UniProtKB:P05793 | has_cofactor | magnesium(2+)CHEBI:18420 |
|
Acetolactate synthase isozyme 1 large subunitUniProtKB:P08142 | enables | acetolactate synthase reactionRHEA:25250 |
|
Acetolactate synthase isozyme 1 large subunitUniProtKB:P08142 | has_cofactor | magnesium(2+)CHEBI:18420 |
|
Acetolactate synthase isozyme 1 large subunitUniProtKB:P08142 | has_cofactor | thiamine(1+) diphosphate(3-)CHEBI:58937 |
|
Branched-chain-amino-acid aminotransferaseUniProtKB:P0AB80 | enables | L-valine aminotransferase reactionRHEA:24815 |
|
Branched-chain-amino-acid aminotransferaseUniProtKB:P0AB80 | has_cofactor | pyridoxal 5'-phosphate(2-)CHEBI:597326 |
|
Acetolactate synthase isozyme 1 small subunitUniProtKB:P0ADF8 | enables | acetolactate synthase reactionRHEA:25250 |
|
Acetolactate synthase isozyme 2 small subunitUniProtKB:P0ADG1 | enables | acetolactate synthase reactionRHEA:25250 |
|
Acetolactate synthase isozyme 2 small subunitUniProtKB:P0ADG1 | has_cofactor | magnesium(2+)CHEBI:18420 |
|
Acetolactate synthase isozyme 2 small subunitUniProtKB:P0ADG1 | has_cofactor | thiamine(1+) diphosphate(3-)CHEBI:58937 |
|
References
MetaCyc:VALSYN-PWYMetaCyc L-valine biosynthesis pathway (source version: 22.5)RHEA:25249Rhea acetolactate synthase reaction (source version: 139)RHEA:25250Rhea acetolactate synthase direction (source version: 139)RHEA:22068Rhea acetohydroxy acid isomeroreductase reaction (source version: 139)RHEA:22070Rhea biosynthetic acetohydroxy acid isomeroreductase direction (source version: 139)RHEA:24809Rhea dihydroxy-acid dehydratase reaction (source version: 139)RHEA:24810Rhea dihydroxy-acid-to-3-methyl-2-oxobutanoate direction (source version: 139)RHEA:24813Rhea branched-chain-amino-acid transaminase reaction (source version: 139)RHEA:24815Rhea biosynthetic L-valine transaminase direction (source version: 139)PMID:3301814Barak et al., Journal of Bacteriology, 1987PMID:27136273Tadrowski et al., Chemistry - A European Journal, 2016PMID:13727223Myers, Journal of Biological Chemistry, 1961PMID:378964Lee-Peng et al., Journal of Bacteriology, 1979UniProtKB:P00893UniProtKB:P00893 authority record (source version: 2026_03)UniProtKB:P00894UniProtKB:P00894 authority record (source version: 2026_03)UniProtKB:P05791UniProtKB:P05791 authority record (source version: 2026_03)UniProtKB:P05793UniProtKB:P05793 authority record (source version: 2026_03)UniProtKB:P08142UniProtKB:P08142 authority record (source version: 2026_03)UniProtKB:P0AB80UniProtKB:P0AB80 authority record (source version: 2026_03)UniProtKB:P0ADF8UniProtKB:P0ADF8 authority record (source version: 2026_03)UniProtKB:P0ADG1UniProtKB:P0ADG1 authority record (source version: 2026_03)
Curation history
- codex
- EDIT — Review causal chemistry and add sourced molecular context
Reviewed the entire record against MetaCyc 22.5 native pathway XML (including nested pathways), Rhea 139 explicit sides and directions, ENZYME 02-Sep-2026, PubMed records, and reviewed UniProt 2026_03 annotations within the record's taxon scope. Replaced generated structured-source quotations with source_assertion and source_locator. Typed molecular activities and participants. Reaction count 4 to 4; 0 directed-ID corrections; 8 protein annotations, 10 cofactor annotations and 1 sourced locations. All Rhea reaction substrate/product sets checked against independent Rhea authority; native pathway leaf coverage and source exceptions recorded in reports/causal_graph_review/metacyc-review.json. Full source URLs, versions and byte hashes are in metacyc-sources.json. All 50 MetaCyc records passed native schema validation; six targeted chemistry/evidence regression tests passed. Missing protein or cofactor annotations are not treated as biological absence; qualifications and exclusions are preserved in the ledger. Cluster nuclearity is left unspecified: the current UniProt annotation infers [2Fe-2S], while its caution cites older E. coli [4Fe-4S] evidence and a later M. tuberculosis result. Excluded repaired ilvG frameshift mutant; the ordinary K12 gene is disrupted.
- EDIT — Review causal chemistry and add sourced molecular context