Pathway browser
Search the published collection by name or identifier. Open a record to inspect its mechanistic edges, participants, and cited evidence.
Browse pathway recordsMicrobial pathway knowledge base
PathwayMech
Explore microbial pathways, their molecular participants, and the evidence behind their mechanistic connections.
- Pathway records
- 225
- Taxa represented
- 36
- Mechanistic edges
- 11,024
- Distinct references
- 3,269
Explore PathwayMech
Find a pathway, follow its evidence, or contribute a record.
Source records
Inspect the underlying YAML records, including pathway descriptions, organism scope, molecular participants, and references.
Explore source recordsCuration guide
Learn how to describe a pathway, connect its mechanism, and attach evidence to individual edges.
Read the curation guideDownload the complete pathway graph
KGX TSV exports from the same 225 pathway records shown here: All nodes (TSV) and All edges (TSV). Version, row counts and file checksums.
Graph version: 1b8720e815afe4c43f4883109daa1c72b15205b2c71ad940440c2d1f4211b1e9.
Data: CC BY 4.0;
upstream source terms still apply.