CellStructureMech

Inclusion

Storage and buoyancy bodies — PHA granules, polyphosphate, gas vesicles.

20 records

Records
Label and definitionIdentifierCategoryKindStatus
age-associated protein deposit

An aging-associated protein inclusion characterized in budding yeast that collects aggregation-prone proteins, usually persists as a single ER-associated deposit, and is preferentially retained in the mother-cell lineage.

cellstructuremech:age_associated_protein_depositInclusionInclusion bodyProposed
bacterial aggresome

A stress-associated, membraneless cytoplasmic inclusion in bacteria that concentrates endogenous proteins and can sequester mRNA; Escherichia coli aggresomes exhibit liquid-like dynamics and preserve selected transcripts during stress.

cellstructuremech:bacterial_aggresomeInclusionInclusion bodyProposed
cyanophycin granule

A bacterial storage inclusion in which insoluble cyanophycin polymer accumulates as cytoplasmic granules that store fixed nitrogen and carbon for later mobilization.

cellstructuremech:cyanophycin_granuleInclusionInclusion bodyProposed
gas vesicle

A gas-filled, non-membrane-bounded protein organelle, usually shaped as a cylindrical shell with conical end caps. Its gas-permeable, water-excluding wall lowers cell density and enables buoyancy regulation in aquatic microbes.

GO:0031411InclusionProtein shelled organelleProposed
gas vesicle shell

The proteinaceous structure surrounding a gas vesicle.

GO:0033172InclusionMultiprotein complexProposed
glycogen granule

A microbial carbohydrate storage inclusion in which glycogen polymer accumulates as cytoplasmic granules that store glucose-derived carbon and energy for later mobilization.

cellstructuremech:glycogen_granuleInclusionInclusion bodyProposed
insoluble protein deposit

A perivacuolar cytoplasmic protein inclusion characterized in budding yeast that accumulates poorly mobile, insoluble protein aggregates, including amyloid and prion cargo, at a site distinct from nuclear and juxtanuclear quality-control deposits.

cellstructuremech:insoluble_protein_depositInclusionInclusion bodyProposed
intranuclear quality control compartment

A stress-induced membraneless nuclear inclusion characterized in budding yeast that concentrates misfolded and other conditionally recruited proteins near the nuclear envelope, distinct from the cytoplasmic juxtanuclear quality control compartment.

cellstructuremech:intranuclear_quality_control_compartmentInclusionInclusion bodyProposed
juxtanuclear quality control compartment

A cytoplasmic, perinuclear protein-quality-control inclusion characterized in budding yeast, formed by congregation of misfolded-protein deposits near the nuclear envelope and distinct from the intranuclear quality control compartment.

cellstructuremech:juxtanuclear_quality_control_compartmentInclusionInclusion bodyProposed
lipid droplet

An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.

GO:0005811InclusionInclusion bodyProposed
MitoStore

A transient cytosolic protein granule characterized in budding yeast that sequesters non-imported mitochondrial precursor proteins, is enriched for presequence-containing cargo and associates with the mitochondrial surface.

cellstructuremech:mitostoreInclusionInclusion bodyProposed
monolayer-surrounded lipid storage body outer lipid monolayer

The single layer of phospholipids surrounding a lipid storage body.

GO:0034430InclusionMembraneProposed
nucleolar peripheral inclusion body

An intranuclear inclusion at the nucleolar periphery in which nuclear factors collect reversibly during acute heat stress or starvation.

GO:0140602InclusionInclusion bodyProposed
parasporal crystal

A proteinaceous Bacillus thuringiensis inclusion body that accumulates Cry, Cyt, and related pesticidal crystal proteins as a parasporal crystalline deposit.

cellstructuremech:parasporal_crystalInclusionInclusion bodyProposed
plastoglobule

A lipoprotein particle present in chloroplasts.

GO:0010287InclusionInclusion bodyProposed
polyhydroxyalkanoate granule

A cytoplasmic prokaryotic inclusion body in which polyhydroxyalkanoate storage polymers condense with granule-associated proteins, including PHA synthases and phasins, to form hydrophobic carbon- and reducing-power storage granules.

GO:0070088InclusionInclusion bodyProposed
proteasome storage granule

A cytoplasmic, membrane-free accumulation of proteasome core and regulatory particles observed as discrete foci during cellular quiescence.

GO:0034515InclusionInclusion bodyProposed
protein aggregate center

A reversible intracellular assembly of misfolded proteins and chaperones that temporarily protects heat-sensitive clients from degradation and can be disassembled when conditions permit recovery.

GO:0140453InclusionInclusion bodyProposed
R-body

A bacterial proteinaceous inclusion body assembled from Reb proteins that forms a coiled ribbon and can extend into a hollow tube.

cellstructuremech:r_bodyInclusionInclusion bodyProposed
sulfur globule

A bacterial sulfur storage inclusion that accumulates elemental sulfur from reduced sulfur compounds and packages it with sulfur-globule envelope proteins for temporary storage and later oxidation.

cellstructuremech:sulfur_globuleInclusionInclusion bodyProposed