Overview
- External ontology
- komodo.medium:1007 (source link unavailable) — MINERAL MEDIUM
- Applications
-
- Microbial cultivation
- Synonyms
-
- {'name': 'dsm_15672', 'source': 'KOMODO', 'source_id': 'komodo.medium:1007.1', 'original_category': 'bacterial'}
- {'name': 'dsm_15673', 'source': 'KOMODO', 'source_id': 'komodo.medium:1007.2', 'original_category': 'bacterial'}
- {'name': 'dsm_16984_dsm_24478_24479_24480_24481_24492_24493_and_24527', 'source': 'KOMODO', 'source_id': 'komodo.medium:1007.3', 'original_category': 'bacterial'}
- Notes
- Source: KOMODO ModelSEED | ID: 1007 | DSMZ Medium: 1007 (mediadive.medium:1007) | Aerobic: No
Composition
flowchart LR
CultureMech_003510["mineral_medium"]
ing0_KNO3["KNO3"]
CultureMech_003510 --> ing0_KNO3
CHEBI_63043["CHEBI:63043"]
ing0_KNO3 -.-> CHEBI_63043
ing1_KH2PO4["KH2PO4"]
CultureMech_003510 --> ing1_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing1_KH2PO4 -.-> CHEBI_63036
ing2_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_003510 --> ing2_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing2_MgSO4_x_7_H2O -.-> CHEBI_31795
ing3_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_003510 --> ing3_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_x_2_H2O -.-> CHEBI_86158
ing4_EDTA["EDTA"]
CultureMech_003510 --> ing4_EDTA
CHEBI_4735["CHEBI:4735"]
ing4_EDTA -.-> CHEBI_4735
ing5_CuCl2_x_5_H2O["CuCl2 x 5 H2O"]
CultureMech_003510 --> ing5_CuCl2_x_5_H2O
CHEBI_91245["CHEBI:91245"]
ing5_CuCl2_x_5_H2O -.-> CHEBI_91245
ing6_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_003510 --> ing6_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing6_FeSO4_x_7_H2O -.-> CHEBI_75836
ing7_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_003510 --> ing7_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing7_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing8_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
CultureMech_003510 --> ing8_NiCl2_x_6_H2O
CHEBI_34887["CHEBI:34887"]
ing8_NiCl2_x_6_H2O -.-> CHEBI_34887
ing9_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_003510 --> ing9_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing9_CoCl2_x_6_H2O -.-> CHEBI_53503
ing10_Na2MoO4["Na2MoO4"]
CultureMech_003510 --> ing10_Na2MoO4
CHEBI_75215["CHEBI:75215"]
ing10_Na2MoO4 -.-> CHEBI_75215
ing11_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_003510 --> ing11_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing11_MnCl2_x_4_H2O -.-> CHEBI_86368
Ingredients (12)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
KNO3
K.NO3 101.102 g/mol
|
0.25 G_PER_L |
CHEBI:63043
potassium nitrate
|
|
| 2 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.1 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 3 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.05 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 4 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.01 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 5 |
EDTA
C10H16N2O8 292.244 g/mol
|
5 G_PER_L |
CHEBI:4735
ethylenediaminetetraacetic acid
|
|
| 6 |
CuCl2 x 5 H2O
Cl2Cu.5H2O 224.527 g/mol
|
0.1 G_PER_L |
CHEBI:91245
copper(II) chloride pentahydrate
|
|
| 7 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
2 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 8 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.1 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 9 |
NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
|
0.02 G_PER_L |
CHEBI:34887
nickel dichloride
|
|
| 10 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.2 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 11 |
Na2MoO4
MoO4.2Na 205.916 g/mol
|
0.03 G_PER_L |
CHEBI:75215
sodium molybdate (anhydrous)
|
|
| 12 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.03 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 5 source records.
- KOMODO_1007_MINERAL_MEDIUM (CultureMech:003510)
- dsm_15672 (CultureMech:003507)
- dsm_15673 (CultureMech:003508)
- dsm_16984_dsm_24478_24479_24480_24481_24492_24493_and_24527 (CultureMech:003509)
- mineral_medium (CultureMech:000423)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1007 |
| 2026-02-03T11:19:19.991083 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1007 |
| 2026-03-13T06:19:20.296567Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003510 |
| 2026-03-17T06:30:58.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:34.409528+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MINERAL MEDIUM" to "mineral_medium" for consistent matching |
| 2026-06-05T07:40:18.090520+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:34.125090+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-06-10T07:46:43.242546+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:37.790532+00:00 | recipe-merger | Merged 5 duplicate recipes into canonical record | Sources: KOMODO_1007_MINERAL_MEDIUM, dsm_15672, dsm_15673, dsm_16984_dsm_24478_24479_24480_24481_24492_24493_and_24527, mineral_medium |
| 2026-08-06T03:04:37.790595+00:00 | merge_recipes.py | MERGED_RECIPES | merged 5 source recipe(s) on fingerprint 56aec63bdae1f83df3fafa7920911eb8ef41b90e04c10ee751a9a847f09bedf5 |