All families / PF01026
PF01026: TatD_DNase
TatD related DNase
- Curation status
- SEEDED
- Seed status
- EX DUF
- Characterization
- UNSCORED
Grounding
PF01026: TatD related DNase
IPR001130: integrated entry for TatD related DNase
Source description
This family of proteins are related to a large superfamily of metalloenzymes [InterPro reference PUB00004994]. TatD, a member of this family has been shown experimentally to be a DNase enzyme.
Evidence and references
- InterPro entry and its literature references. PUB identifiers are internal InterPro references, not PubMed identifiers. Unresolved citations link to the originating entry.
- Frozen description source: InterPro/Pfam API
Source descriptions and links are provenance, not independent functional validation.
Evidence counts: not scored.
Curated functional assertions
No curated functional assertions supplied.
Protein sequence examples
18 verified sequence examples. FASTA
| UniProt | Protein / organism | Sequence | Provenance |
|---|---|---|---|
| D8MKW4 | 3'-5' ssDNA/RNA exonuclease TatD Erwinia billingiae (strain Eb661) | 261 aa; version 1 UniProt 2026_03 | UNIPROT FETCH1 sibling references |
| O08343 | Uncharacterized metal-dependent hydrolase TatD Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) | 264 aa; version 1 UniProt 2026_03 | UNIPROT FETCH1 sibling references |
| P0AFQ7 | Uncharacterized metal-dependent hydrolase YcfH Escherichia coli (strain K12) | 265 aa; version 1 UniProt 2026_03 | PTM REGISTRY MIRROR |
| P27859 | 3'-5' ssDNA/RNA exonuclease TatD Escherichia coli (strain K12) | 260 aa; version 3 UniProt 2026_03 | PTM REGISTRY MIRROR9 sibling references |
| P34220 | Deoxyribonuclease Tat-D Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | 418 aa; version 1 UniProt 2026_03 | UNIPROT FETCH2 sibling references |
| P37545 | Uncharacterized metal-dependent hydrolase YabD Bacillus subtilis (strain 168) | 255 aa; version 1 UniProt 2026_03 | PTM REGISTRY MIRROR |
| P38430 | Uncharacterized deoxyribonuclease YMR262W Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | 313 aa; version 3 UniProt 2026_03 | UNIPROT FETCH1 sibling references |
| P39408 | Uncharacterized metal-dependent hydrolase YjjV Escherichia coli (strain K12) | 259 aa; version 2 UniProt 2026_03 | PTM REGISTRY MIRROR |
| P73335 | D-aminoacyl-tRNA deacylase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) | 261 aa; version 1 UniProt 2026_03 | UNIPROT FETCH1 sibling references |
| Q17R31 | Deoxyribonuclease TATDN3 Homo sapiens | 274 aa; version 1 UniProt 2026_03 | UNIPROT FETCH2 sibling references |
First 10 shown; the FASTA and family JSON contain all examples.
Pfam membership is not functional evidence. Whole-protein sequences do not establish domain boundaries. A coverage gap here is not absence from UniProt.
Sequences and metadata: UniProt Consortium, CC BY 4.0.
Domain matches
No residue-level domain match evidence is available in this build. Structure and AlphaFold counters do not supply coordinates or establish function.
Snapshot counters
- proteins
- 42,146
- matches
- 42,379
- proteomes
- 21,954
- taxa
- 35,333
- structures
- 16
- alphafold models
- 29,396
- domain architectures
- 259
Classification basis
pfam previous unknown name
No scoring reasons supplied.
Related Mech records
This family joined the worklist after the frozen cross-Mech scan, so other Mechs were not searched for it. Missing links here are not evidence that other Mechs lack it; rows shown come from mentions of a former DUF/UPF name.
No cross-Mech examples are present in the supplied snapshot.
Curation history and reviews
No retained curation events supplied.
No retained review supplied.
Record source
Status and evidence
- Seed status
- A name-based classification of frozen InterPro/Pfam metadata. UNKNOWN CANDIDATE means the metadata explicitly says the function is unknown. KNOWN HISTORICAL DUF means a DUF name matched without that wording; this heuristic is not proof of a known function and does not establish experimental characterization. EX DUF means Pfam renamed the family away from a DUF/UPF name, as recorded in Pfam's previous identifiers; a rename usually follows published work on some members but is naming history, not proof of function for every member. Some EX DUF families' current names or descriptions still say the function is unknown; their classification basis lists this, and scoring does not treat them as characterized. FALSE POSITIVE TEXT HIT means the naming rules did not match.
- Characterization
- A separate evidence-scoring result. UNSCORED means no score has been calculated; it is not evidence that the family lacks a known function. Missing scores are not negative evidence. PARTIALLY CHARACTERIZED has partial support; KNOWN HISTORICAL DUF can inherit the seed label or reflect a known-function signal. Neither label implies experimental validation.
- Evidence counts
- Source-specific signals, not unique proteins, publications, or confidence scores. Known counts Rhea reactions and experimentally supported GO molecular-function annotations. Partial counts functional/domain assignments. Context counts structural, environmental, orthology, interaction and neighborhood signals; context alone does not assign function. Repeated annotations may not be independent.
- Curation status
- Reported separately from seed classification and characterization. SNAPSHOT ONLY means no curated metadata was supplied for this build. SEEDED denotes a source-derived record, not an expert-reviewed functional claim.
- Missing counts
- Not available means the source did not supply that counter. A zero is a reported count. Not scored means evidence counts are unavailable.