DUFMech

All families / PF05142

PF05142: DUF702

Domain of unknown function (DUF702)

Curation status
SEEDED
Seed status
UNKNOWN CANDIDATE
Characterization
UNSCORED

Grounding

PF05142: Domain of unknown function (DUF702)
No integrated InterPro identifier in the snapshot.

Source description

Members of this family are found in various putative zinc finger proteins.

Evidence and references

Source descriptions and links are provenance, not independent functional validation.

Evidence counts: not scored.

Curated functional assertions

No curated functional assertions supplied.

Protein sequence examples

10 verified sequence examples. FASTA

UniProtProtein / organismSequenceProvenance
F4KH89Protein SHI RELATED SEQUENCE 8
Arabidopsis thaliana
173 aa; version 1
UniProt 2026_03
UNIPROT FETCH
2 sibling references
O65517Protein SHI RELATED SEQUENCE 2
Arabidopsis thaliana
322 aa; version 1
UniProt 2026_03
UNIPROT FETCH
4 sibling references
Q652K4Protein SHORT INTERNODES 1
Oryza sativa subsp. japonica
315 aa; version 1
UniProt 2026_03
UNIPROT FETCH
1 sibling references
Q94CK9Protein LATERAL ROOT PRIMORDIUM 1
Arabidopsis thaliana
320 aa; version 1
UniProt 2026_03
PTM REGISTRY MIRROR
8 sibling references
Q9FXH7Protein SHI RELATED SEQUENCE 7
Arabidopsis thaliana
345 aa; version 1
UniProt 2026_03
UNIPROT FETCH
5 sibling references
Q9LQZ5Protein SHI RELATED SEQUENCE 5
Arabidopsis thaliana
346 aa; version 1
UniProt 2026_03
UNIPROT FETCH
4 sibling references
Q9M2U4Protein SHI RELATED SEQUENCE 6
Arabidopsis thaliana
183 aa; version 1
UniProt 2026_03
UNIPROT FETCH
2 sibling references
Q9SD40Protein SHI RELATED SEQUENCE 1
Arabidopsis thaliana
370 aa; version 2
UniProt 2026_03
UNIPROT FETCH
4 sibling references
Q9SJT8Protein SHI RELATED SEQUENCE 3
Arabidopsis thaliana
174 aa; version 1
UniProt 2026_03
UNIPROT FETCH
4 sibling references
Q9XGX0Protein SHORT INTERNODES
Arabidopsis thaliana
331 aa; version 1
UniProt 2026_03
UNIPROT FETCH
7 sibling references

Pfam membership is not functional evidence. Whole-protein sequences do not establish domain boundaries. A coverage gap here is not absence from UniProt.

Sequences and metadata: UniProt Consortium, CC BY 4.0.

Domain matches

No residue-level domain match evidence is available in this build. Structure and AlphaFold counters do not supply coordinates or establish function.

Snapshot counters

proteins
4,031
matches
4,180
proteomes
691
taxa
2,200
structures
0
alphafold models
3,251
domain architectures
53

Classification basis

short name matches duf; name says unknown function; domain of unknown function

No scoring reasons supplied.

Related Mech records

FamilyMechRecordProteinLink basis
DUF702 (PF05142)ProteinTraitsMechanther developmentQ94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechanther developmentQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechauxin biosynthetic processQ94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechauxin biosynthetic processQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechnegative regulation of gibberellic acid mediated signaling pathwayQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalO65517
Protein SHI RELATED SEQUENCE 2
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9FXH7
Protein SHI RELATED SEQUENCE 7
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9LQZ5
Protein SHI RELATED SEQUENCE 5
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9M2U4
Protein SHI RELATED SEQUENCE 6
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9SD40
Protein SHI RELATED SEQUENCE 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9SJT8
Protein SHI RELATED SEQUENCE 3
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechShort internodes, C-terminalQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1F4KH89
Protein SHI RELATED SEQUENCE 8
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1O65517
Protein SHI RELATED SEQUENCE 2
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q9FXH7
Protein SHI RELATED SEQUENCE 7
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q9LQZ5
Protein SHI RELATED SEQUENCE 5
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q9SD40
Protein SHI RELATED SEQUENCE 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q9SJT8
Protein SHI RELATED SEQUENCE 3
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechZinc finger, lateral root primordium type 1Q9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainO65517
Protein SHI RELATED SEQUENCE 2
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9FXH7
Protein SHI RELATED SEQUENCE 7
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9LQZ5
Protein SHI RELATED SEQUENCE 5
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9M2U4
Protein SHI RELATED SEQUENCE 6
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9SD40
Protein SHI RELATED SEQUENCE 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9SJT8
Protein SHI RELATED SEQUENCE 3
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechLRP1 C-terminal domainQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeF4KH89
Protein SHI RELATED SEQUENCE 8
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeO65517
Protein SHI RELATED SEQUENCE 2
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ9FXH7
Protein SHI RELATED SEQUENCE 7
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ9LQZ5
Protein SHI RELATED SEQUENCE 5
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ9SD40
Protein SHI RELATED SEQUENCE 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ9SJT8
Protein SHI RELATED SEQUENCE 3
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechputative zinc finger domain, LRP1 typeQ9XGX0
Protein SHORT INTERNODES
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechDomain of unknown function (DUF702)Q652K4
Protein SHORT INTERNODES 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechDomain of unknown function (DUF702)Q94CK9
Protein LATERAL ROOT PRIMORDIUM 1
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechDomain of unknown function (DUF702)Q9FXH7
Protein SHI RELATED SEQUENCE 7
canonical example family classification
DUF702 (PF05142)ProteinTraitsMechDomain of unknown function (DUF702)
trait identifier

Curation history and reviews

No retained curation events supplied.

No retained review supplied.

Record source

data/families/PF05142.yaml
Family YAML in this build

Download this family (JSON)

Status and evidence

Seed status
A name-based classification of frozen InterPro/Pfam metadata. UNKNOWN CANDIDATE means the metadata explicitly says the function is unknown. KNOWN HISTORICAL DUF means a DUF name matched without that wording; this heuristic is not proof of a known function and does not establish experimental characterization. EX DUF means Pfam renamed the family away from a DUF/UPF name, as recorded in Pfam's previous identifiers; a rename usually follows published work on some members but is naming history, not proof of function for every member. Some EX DUF families' current names or descriptions still say the function is unknown; their classification basis lists this, and scoring does not treat them as characterized. FALSE POSITIVE TEXT HIT means the naming rules did not match.
Characterization
A separate evidence-scoring result. UNSCORED means no score has been calculated; it is not evidence that the family lacks a known function. Missing scores are not negative evidence. PARTIALLY CHARACTERIZED has partial support; KNOWN HISTORICAL DUF can inherit the seed label or reflect a known-function signal. Neither label implies experimental validation.
Evidence counts
Source-specific signals, not unique proteins, publications, or confidence scores. Known counts Rhea reactions and experimentally supported GO molecular-function annotations. Partial counts functional/domain assignments. Context counts structural, environmental, orthology, interaction and neighborhood signals; context alone does not assign function. Repeated annotations may not be independent.
Curation status
Reported separately from seed classification and characterization. SNAPSHOT ONLY means no curated metadata was supplied for this build. SEEDED denotes a source-derived record, not an expert-reviewed functional claim.
Missing counts
Not available means the source did not supply that counter. A zero is a reported count. Not scored means evidence counts are unavailable.