has phenotype

Provenance

Source

METPO (2025-11-25)

Parent traits (1)

• has quality METPO:2000101

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

• metabolism has quality 0.970
• metabolism organism interacts with chemical 0.503
• metabolism transports 0.484
• metabolism accumulates 0.484
• metabolism enzyme activity analyzed 0.482
• metabolism exports 0.477
• metabolism sequesters 0.476
• metabolism does not build base from 0.475

Curation history

1. 2026-05-05T01:35:46.982025+00:00 · SEEDED_FROM_METPO · seed_from_metpo

   imported from data/raw/metpo.owl (OBJECT_PROPERTY)

2. 2026-05-10T00:00:00-07:00 · DEPRECATED_PROPERTY_RECORD · codex

   Deprecated generic metabolism relation carrier; later replacement should use more specific trait records that combine the relation with the chemical, phenotype, quality, compartment, enzyme or activity target, growth context, measurement, or other entity.

3. 2026-05-17T15:30:00-07:00 · DEPRECATION_CONFIRMED_AS_OUT_OF_SCOPE · claude

   DEPRECATED status confirmed as final after the predicate+class composition pivot (#54/#55/#56). This record's observation-shape modelling is out of scope for TraitMech; the trait vocabulary + mechanism need is met by the un- deprecated METPO predicates, and per-organism numeric observations belong downstream (KG-Microbe / BacDive). See docs/DEPRECATED_REPLACEMENT_PROPOSAL.md, section 'Observation-value records stay deprecated', for the rationale.